BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B06LP1|AL425639
(783 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1528 0.0
>3x_Contig1682
Length = 16889
Score = 1528 bits (770), Expect = 0.0
Identities = 781/784 (99%), Gaps = 1/784 (0%)
Strand = Plus / Minus
Query: 1 atctgtctgttgttccaacatcgacgaaagtcttatcaacagcgttaatgttcttgacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15841 atctgtctgttgttccaacatcgacgaaagtcttatcaacagcgttaatgttcttgacac 15782
Query: 61 cttcatctagggatgcttgagtgctgaacacagaaacatccttttgcatggtcttttgca 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 15781 cttcatctagggatgcttgagttctgaacacagaaacatccttttgcatggtcttttgca 15722
Query: 121 tggccaatctgatatcagcggttggtctgtgaccggtagcatttctcaacttgtccaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15721 tggccaatctgatatcagcggttggtctgtgaccggtagcatttctcaacttgtccaagt 15662
Query: 181 tagcgatagattccttacccaaatcagctggcaatggcttatgaggtaaacctggttgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15661 tagcgatagattccttacccaaatcagctggcaatggcttatgaggtaaacctggttgca 15602
Query: 241 aagtgtcagcgatagtatgagcgacagcacgaccgaacacgaccaaatctaacaaggaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15601 aagtgtcagcgatagtatgagcgacagcacgaccgaacacgaccaaatctaacaaggaat 15542
Query: 301 tagcacccaatctgttagcaccgtgaacagagacacaagctgcttcaccacaggcaagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15541 tagcacccaatctgttagcaccgtgaacagagacacaagctgcttcaccacaggcaagta 15482
Query: 361 gacctgggatgagaacatcttcaccggtttcttcatcgatagtcaaagcttcaccgttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15481 gacctgggatgagaacatcttcaccggtttcttcatcgatagtcaaagcttcaccgttcc 15422
Query: 421 acttagttggaataccacccatgtkataatggacagtaggtaagataggaattggttcct 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 15421 acttagttggaataccacccatgttataatggacagtaggtaagataggaattggttcct 15362
Query: 481 tagtgacatcgacaccggcgaaaatggctgcagtttcagagatacctggcaaacgttcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15361 tagtgacatcgacaccggcgaaaatggctgcagtttcagagatacctggcaaacgttcat 15302
Query: 541 gaagcacagaaggtggcaaatggttcaattgcaagaacatgtgatccttttctggaccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15301 gaagcacagaaggtggcaaatggttcaattgcaagaacatgtgatccttttctggaccaa 15242
Query: 601 cacctctaccttctctgatttccatggtgatggcacgagaaacaacgtctctacaagcta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15241 cacctctaccttctctgatttccatggtgatggcacgagaaacaacgtctctacaagcta 15182
Query: 661 aatccttagcagttggagcataacgtt-catgaaacgttcaccttcagagttaaccaaga 719
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 15181 aatccttagcagttggagcataacgttccatgaaacgttcaccttcagagttaaccaaga 15122
Query: 720 aaccaccctcaccacgagcaccttcagtgatcaaacaaccggaaccgtagataccggaag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15121 aaccaccctcaccacgagcaccttcagtgatcaaacaaccggaaccgtagataccggaag 15062
Query: 780 gatg 783
||||
Sbjct: 15061 gatg 15058
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4651
Number of Sequences: 1807
Number of extensions: 4651
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 783
length of database: 10,358,551
effective HSP length: 16
effective length of query: 767
effective length of database: 10,329,639
effective search space: 7922833113
effective search space used: 7922833113
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)